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legend  pdf

structure nameSTRUCTURAL ANALYSIS OF FATTY ACID DEGRADATION REGULATOR FADR FROM BACILLUS HALODURANS
(Transcriptional regulator TetRAcrR family)
referencePark et al. 'Nucleic 45 4244 2017
sourceBacillus halodurans
experimentX-ray (resolution=2.80, R-factor=0.208)
structural superfamilyTetracyclin repressor-like, C-terminal domain;Homeodomain-like;
sequence familyYsiAlike protein, Cterminal region; Bacterial regulatory proteins, tetR family;
multimeric complexes5gpc_ABCD
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureVADTYL

Estimated binding specificities ?

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# IC=2.674 IC/col=0.669 n_of_columns=4 specificity:   
A |   9   9  67  96
C |   9  11   9   0
G |   9  67  11   0
T |  69   9   9   0
scan!

Dendrogram of similar interfaces ?

matrix format

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updated Fri Sep 13 19:38:17 2024