5h3r_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MUTANT MARR C80S FROM E.COLI COMPLEXED WITH OPERATOR DNA
reference	Zhu et al. 'J. 22 685 2017
source	Escherichia coli
experiment	X-ray (resolution=2.67, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5h3r_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5h3r_A interface=64,65,67,69,70,74,91, tsdlfneiiplgrlihmvnqkkdrllneylsplditaaqfkvlcsircaacitpvelkkvlsvDLgAlTRmldRlvskgwverlpnpndkRgvlvklttggaaiceqchqlvgqdlhqeltknltadevatleyllkkvlp > 5h3r_B interface=63,64,66,68,69,90, sdlfneiiplgrlihmvnqkkdrllneylsplditaaqfkvlcsircaacitpvelkkvlsvDLgAlTRmldrlvskgwverlpnpndkRgvlvklttggaaiceqchqlvgqdlhqeltknltadevatleyllkkvlp
interface signature	DLATRRR/DLATRR

Estimated binding specificities ?

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# IC=13.414 IC/col=0.745 n_of_columns=18

specificity:

A |   9  24  24   0  10   0   0   4  24  14   0   0   0  96  96  24  24   4
C |  13  24  24   0  13   0  96  82  24   9   0   0  96   0   0  24  24   6
G |   9  24  24   0   9  96   0   6  24  64  96  96   0   0   0  24  24   4
T |  65  24  24  96  64   0   0   4  24   9   0   0   0   0   0  24  24  82

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updated Tue Sep 10 04:32:20 2024