5hbu_ABCD : 3D-footprint complex

structure name	STRUCTURE OF THE E. COLI NUCLEOID OCCLUSION PROTEIN SLMA BOUND TO DNA AND THE C-TERMINAL TAIL OF THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ
reference	Schumacher et al. Proc.Natl.Acad.Sci.USA 113 4988 2016
source	Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12)
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	4gck_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hbu_A interface=26,36,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5hbu_B interface=32,43,47, aekqakrnrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5hbu_C interface=26,36,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5hbu_D interface=25,36,40, nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq
interface signature	TSEAAYR/TEY/TSEAAYR/TEY

Estimated binding specificities ?

readout + contact

# IC=8.798 IC/col=0.733 n_of_columns=12

specificity:

A |   0   0  24  24   0  19  14   0  12  24  96   0
C |   0   0  24  24   0  14  64  96  21  24   0  96
G |  96   0  24  24  96   6   6   0  19  24   0   0
T |   0  96  24  24   0  57  12   0  44  24   0   0

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updated Tue Sep 10 04:36:52 2024