5hbu_EGH : 3D-footprint complex

structure name	STRUCTURE OF THE E. COLI NUCLEOID OCCLUSION PROTEIN SLMA BOUND TO DNA AND THE C-TERMINAL TAIL OF THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ
reference	Schumacher et al. Proc.Natl.Acad.Sci.USA 113 4988 2016
source	Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12)
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	4gck_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hbu_E interface=26,36,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5hbu_G interface=26,36,37,38,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAalYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5hbu_H interface=26,37,41, rnrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq
interface signature	TSEAAYR/TSEAYR/TEY

Estimated binding specificities ?

readout + contact

# IC=5.961 IC/col=0.497 n_of_columns=12

specificity:

A |   0   3  26  31   2  15  51   2  20  24  71   7
C |   0   0  15  21   5  14  14  89  21  27   8  74
G |  96   0  33  21  85  19  17   4  21  22   8   7
T |   0  93  22  23   4  48  14   1  34  23   9   8

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updated Tue Sep 10 04:36:39 2024