5hlg_FH : 3D-footprint complex

structure name	STRUCTURE OF REDUCED ABFR BOUND TO DNA
reference	Yang et al. 'J. 139 1598 2017
source	Staphylococcus epidermidis
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5hlg_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hlg_F interface=67,68,69,71,72,93, nmkqeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie > 5hlg_H interface=66,67,68,70,71,92, mkqeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclpydetkyvfeeleqtlkhlie
interface signature	SNTTPR/SNTTPR

Estimated binding specificities ?

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# IC=14.306 IC/col=0.715 n_of_columns=20

specificity:

A |   0   2  88   1   2  24  88  12  24  24  24  24   4   2  24  78  93   2   0   0
C |  96   0   4   2   4  24   4   9  24  24  24  24  88   4  24   4   1   2  93   0
G |   0  93   2   0  12  24   2  66  24  24  24  24   2   2  24   2   2   2   1  96
T |   0   1   2  93  78  24   2   9  24  24  24  24   2  88  24  12   0  90   2   0

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updated Tue Sep 10 04:38:39 2024