5hlg_FH : 3D-footprint complex

structure name	STRUCTURE OF REDUCED ABFR BOUND TO DNA
reference	Yang et al. 'J. 139 1598 2017
source	Staphylococcus epidermidis
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5hlg_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hlg_F interface=67,68,69,71,72,93, nmkqeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie > 5hlg_H interface=66,67,68,70,71,92, mkqeqmrlanqlcfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclpydetkyvfeeleqtlkhlie
interface signature	SNTTPR/SNTTPR

Estimated binding specificities ?

readout + contact

# IC=14.624 IC/col=0.731 n_of_columns=20

specificity:

A |   0   5  87   1   0  24  87  13  24  24  24  24  10   2  24  90  93   5   1   0
C |  96   1   2   2   2  24   2   2  24  24  24  24  71   2  24   2   0   2  93   0
G |   0  90   2   0   7  24   5  79  24  24  24  24   5   2  24   2   3   2   0  96
T |   0   0   5  93  87  24   2   2  24  24  24  24  10  90  24   2   0  87   2   0

scan!

home
updated Wed Jul 30 08:13:07 2025