5hlh_AC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE OVEROXIDIZED ABFR BOUND TO DNA
reference	Yang et al. 'J. 139 1598 2017
source	Staphylococcus epidermidis
experiment	X-ray (resolution=3.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hlh_A interface=63,64,65,67,68,89, qeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaisscydetkyvfeeleqtlkhliek > 5hlh_C interface=62,63,64,66,67,71,88, eqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkRleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhli
interface signature	SNTTPR/SNTTPRR

Estimated binding specificities ?

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# IC=14.483 IC/col=0.724 n_of_columns=20

specificity:

A |   0   0  89   1  13  24  96  13  24  24  24  24  15   0  24  89  93   2   0   0
C |  96   0   2   2   3  24   0  16  24  24  24  24  54   2  24   3   0   2  96   0
G |   0  96   2   0  16  24   0  65  24  24  24  24  16   1  24   2   2   1   0  96
T |   0   0   3  93  64  24   0   2  24  24  24  24  11  93  24   2   1  91   0   0

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updated Sat Dec 14 02:48:26 2024