5hlh_FH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE OVEROXIDIZED ABFR BOUND TO DNA
reference	Yang et al. 'J. 139 1598 2017
source	Staphylococcus epidermidis
experiment	X-ray (resolution=3.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hlh_F interface=65,66,67,69,91, mkqeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTpmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie > 5hlh_H interface=65,66,67,69,70,91, mkqeqmrlanqlfsaynvsrlfaqfyekklkqfgitysqylvlltlweenpqtlnsigrhldlsSNTlTPmlkrleqsgwvkrerqqsdkRqliitltdngqqqqeavfeaissclydetkyvfeeleqtlkhlie
interface signature	SNTTR/SNTTPR

Estimated binding specificities ?

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# IC=14.324 IC/col=0.716 n_of_columns=20

specificity:

A |   0   3  90   0   9  24  90  10  24  24  24  24  11   4  24  90  94   1   0   0
C |  96   0   4   1   9  24   1   1  24  24  24  24  55   1  24   1   1   4  96   0
G |   0  92   1   1  13  24   4  78  24  24  24  24  17   1  24   4   1   1   0  96
T |   0   1   1  94  65  24   1   7  24  24  24  24  13  90  24   1   0  90   0   0

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updated Sat Dec 14 02:49:03 2024