5hnf_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PYRENE- AND PHENANTHRENE-MODIFIED DNA IN COMPLEX WITH THE BPUJ1 ENDONUCLEASE BINDING DOMAIN (Restriction endonuclease R.BpuJI)
reference	Langenegger et al. 'Nucleic 44 7079 2016
source	Bacillus pumilus
experiment	X-ray (resolution=1.55, R-factor=0.172)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5hnf_A interface=14,16,19,62,63,66,69,70,120,201,203,207, nynpeeqfrctiiRgKakNmldnllpayaniiddicpcdkasfvkdfnnrlieilgeettkKTldNhrTEiagklfgmfyeddevifpsgrtnkyiedsdqpaffkdicfkfqfpngmdKldkviekvgakiqirqfpyilqvlltadnnniqlskddiayyvlnslqvlqgkikpieviekiiedrsnditkkvrhpgkEtSysmQhireqlnylelanliridgnlvklnyreaeninyiaqfwgnkpefnaykydftseddkksffkdwqqyysnvn
interface signature	RKNKTNTEKESQ

readout + contact

# IC=7.099 IC/col=1.014 n_of_columns=7

A |  54   0   0   0   0   0  16
C |  13  96  96  96   0   0  13
G |  16   0   0   0  96   0  54
T |  13   0   0   0   0  96  13

home
updated Tue Dec 17 01:51:57 2024