5i44_DEFGHI : 3D-footprint complex

structure name	STRUCTURE OF RACA-DNA COMPLEX; P21 FORM
reference	'Nucleic 44 5438 2016 X-RAY DIFFRACTION
source	Bacillus subtilis
experiment	X-ray (resolution=2.62, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	5i44_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5i44_D interface=18,21,22, gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihl > 5i44_E interface=18,22, gshmntnmvaselgvsaKtvqRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp > 5i44_F interface=18,21,22, gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp > 5i44_G interface=17,20, shmntnmvaselgvsaKtvQrwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlpk > 5i44_H interface=15,18,19,35, mntnmvaselgvsaKtvQRwvkqlnlpaernelgHysftaedvkvlksvkkqisegtaiqdihl > 5i44_I interface=15,18,19, mntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp
interface signature	KQR/KR/KQR/KQ/KQRH/KQR

Estimated binding specificities ?

readout + contact

# IC=26.352 IC/col=1.054 n_of_columns=25

specificity:

A |   5   0   2   0  96   0   0  96   0   8  24  24  11   0   0   0   2   0  96   0   0  75   0   0   2
C |  75   0   2  96   0   0   0   0  96  11  24  24  11   0  96   0   5  96   0   0   0   5  96   0  87
G |   8  96   2   0   0   0  96   0   0  66  24  24  66  96   0  96   2   0   0   0  96   8   0  96   2
T |   8   0  90   0   0  96   0   0   0  11  24  24   8   0   0   0  87   0   0  96   0   8   0   0   5

scan!

home
updated Tue Sep 10 04:54:12 2024