5i44_DEFGHI : 3D-footprint complex

structure name	STRUCTURE OF RACA-DNA COMPLEX; P21 FORM
reference	'Nucleic 44 5438 2016 X-RAY DIFFRACTION
source	Bacillus subtilis
experiment	X-ray (resolution=2.62, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5i44_D interface=18,21,22, gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihl > 5i44_E interface=18,22, gshmntnmvaselgvsaKtvqRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp > 5i44_F interface=18,21,22, gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp > 5i44_G interface=17,20, shmntnmvaselgvsaKtvQrwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlpk > 5i44_H interface=15,18,19,35, mntnmvaselgvsaKtvQRwvkqlnlpaernelgHysftaedvkvlksvkkqisegtaiqdihl > 5i44_I interface=15,18,19, mntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp
interface signature	KQR/KR/KQR/KQ/KQRH/KQR

Estimated binding specificities ?

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# IC=26.137 IC/col=1.045 n_of_columns=25

specificity:

A |   5   0   0  14   0  96   0   0  84   0   0   0   8  24  24  11   0   0   0  96   0   0  87   0  14
C |   2  96   0   8  96   0   0   0   2  96   0  96  72  24  24  72   0   0  96   0   0   0   2  96   8
G |  87   0  96   8   0   0   0  96   8   0  96   0  11  24  24   5  96   0   0   0   0  96   2   0  69
T |   2   0   0  66   0   0  96   0   2   0   0   0   5  24  24   8   0  96   0   0  96   0   5   0   5

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updated Sat Dec 14 03:04:20 2024