5i44_DEFGHI : 3D-footprint complex

structure name	STRUCTURE OF RACA-DNA COMPLEX; P21 FORM
reference	'Nucleic 44 5438 2016 X-RAY DIFFRACTION
source	Bacillus subtilis
experiment	X-ray (resolution=2.62, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	5i44_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5i44_D interface=18,21,22, gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihl > 5i44_E interface=18,22, gshmntnmvaselgvsaKtvqRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp > 5i44_F interface=18,21,22, gshmntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp > 5i44_G interface=17,20, shmntnmvaselgvsaKtvQrwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlpk > 5i44_H interface=15,18,19,35, mntnmvaselgvsaKtvQRwvkqlnlpaernelgHysftaedvkvlksvkkqisegtaiqdihl > 5i44_I interface=15,18,19, mntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp
interface signature	KQR/KR/KQR/KQ/KQRH/KQR

Estimated binding specificities ?

readout + contact

# IC=26.439 IC/col=1.058 n_of_columns=25

specificity:

A |   3   0   0   9   0  96   0   0  81   0   0   0   9  24  24   3   0   0   0  96   0   0  87   0  12
C |   4  96   0  11  96   0   0   0   3  96   0  96  66  24  24  87   0   0  96   0   0   0   3  96   6
G |  86   0  96   6   0   0   0  96   6   0  96   0   9  24  24   0  96   0   0   0   0  96   3   0  73
T |   3   0   0  70   0   0  96   0   6   0   0   0  12  24  24   6   0  96   0   0  96   0   3   0   5

scan!

home
updated Mon Jan 5 17:33:58 2026