5i44_I : 3D-footprint complex

structure name	STRUCTURE OF RACA-DNA COMPLEX; P21 FORM (Chromosome-anchoring protein RacA)
reference	'Nucleic 44 5438 2016 X-RAY DIFFRACTION
source	Bacillus subtilis
experiment	X-ray (resolution=2.62, R-factor=?)
structural superfamily	Putative DNA-binding domain;
multimeric complexes	5i44_AB 5i44_DEFGHI 5i44_JK
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5i44_I interface=15,18,19, mntnmvaselgvsaKtvQRwvkqlnlpaernelghysftaedvkvlksvkkqisegtaiqdihlp
interface signature	KQR

Estimated binding specificities ?

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# IC=5.766 IC/col=0.961 n_of_columns=6

specificity:

A |   0   0  96   0  13  16
C |   0   0   0  96  13  54
G |   0  96   0   0  54  13
T |  96   0   0   0  16  13

scan!

Dendrogram of similar interfaces ?

matrix format

  
  RART------         +----4r24_B    
                   +-2 
  RGRTYT--KT   L   ! !    +7tea_B    
                 --3 +----1 
  RG--HTHCYG   L   !      +1r8d_B    
                   ! 
  RCRT------       +-----7tec_A

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updated Fri Sep 13 19:49:47 2024