Estimated binding specificities ?

structure nameCRYSTAL STRUCTURE OF THE MITOCHONDRIAL DNA PACKAGING PROTEIN ABF2P IN COMPLEX WITH DNA AT 2.6 ANGSTROM RESOLUTION
(ARS-binding factor 2, mitochondrial)
referenceChakraborty et al. 'Nucleic 45 951 2017
sourceSaccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
experimentX-ray (resolution=2.60, R-factor=0.228)
structural superfamilyHMG-box;
sequence familyHMG high mobility group box;
multimeric complexes5jgh_ADGJ 5jh0_AD
reference complex5jh0_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
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# IC=12.742 IC/col=0.750 n_of_columns=17 specificity:   
A |  78   6  96  96  96  24  24  24  24  78   0  24  96   0  96   6  78
C |   6   6   0   0   0  24  24  24  24   6   0  24   0   0   0   6   6
G |   6   6   0   0   0  24  24  24  24   6   0  24   0   0   0   6   6
T |   6  78   0   0   0  24  24  24  24   6  96  24   0  96   0  78   6
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updated Mon Dec 18 13:06:06 2023