interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF XERH SITE-SPECIFIC RECOMBINASE BOUND TO PALINDROMIC DIFH SUBSTRATE: POST-CLEAVAGE COMPLEX
referenceBarabas et al. Elife 5 ? 2016
experimentX-ray (resolution=2.40, R-factor=0.196)
structural superfamilyDNA breaking-rejoining enzymes;
sequence familyPhage integrase family;
reference complex5jk0_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRLNTYATNIKTQAYYK

Estimated binding specificities ?

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# IC=11.267 IC/col=1.127 n_of_columns=10 specificity:   
A |   0   0   0  48   0   0  80  96  96  96
C |   0   0   0  16   0   0  16   0   0   0
G |  80   0   0  16   0  96   0   0   0   0
T |  16  96  96  16  96   0   0   0   0   0
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updated Sun Jun 28 13:18:45 2026