5k58_ABEF : 3D-footprint complex

structure name	STRUCTURE OF THE K. PNEUMONIA SLMA-DNA COMPLEX BOUND TO THE C- TERMINAL OF THE CELL DIVISION PROTEIN FTSZ
reference	'Proc. 113 4988 2016 X-RAY DIFFRACTION
source	Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC) / Escherichia coli O139:H28 (strain E24377A / ETEC)
experiment	X-ray (resolution=2.77, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	4gck_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5k58_A interface=26,36,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5k58_B interface=25,36,40, nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5k58_E interface=26,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvsEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 5k58_F interface=25,36,40, nrreeilqslalmlessdgsqritTaklaasvgvsEaalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvmrekrmregegyttdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq
interface signature	TSEAAYR/TEY/TEAAYR/TEY

Estimated binding specificities ?

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# IC=11.042 IC/col=0.920 n_of_columns=12

specificity:

A |   0   0  39  48   0   0  96   0  21  24  96   0
C |   0   1   4  14   0   0   0  96  11  24   0  96
G |  96   4  48  17  96   0   0   0  30  24   0   0
T |   0  91   5  17   0  96   0   0  34  24   0   0

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updated Tue Sep 10 05:54:32 2024