5k98_BP : 3D-footprint complex

structure name	STRUCTURE OF HIPA-HIPB-O2-O3 COMPLEX
reference	Nature 524 59 2015
source	ESCHERICHIA COLI MP020980.2
experiment	X-ray (resolution=3.99, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3dnv_A 5k98_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5k98_B interface=26,35,36,37,38,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQATiSnfennpdnttlttffkilqslelsmtlcdtk > 5k98_P interface=35,36,37,38,40, fqkiysptqlanamklvrqqngwtqselakkigiKQATiSnfennpdnttlttffkilqslelsmtlcdtk
interface signature	SKQATS/KQATS

Estimated binding specificities ?

contact

# IC=12.742 IC/col=0.708 n_of_columns=18

specificity:

A |   6  78   6   0   6   0  24  24  24  24  24  24   0   0   0  78   0  96
C |   6   6   6  96  78  96  24  24  24  24  24  24   0   0   0   6   0   0
G |   6   6   6   0   6   0  24  24  24  24  24  24  96  96  96   6   0   0
T |  78   6  78   0   6   0  24  24  24  24  24  24   0   0   0   6  96   0

scan!

home
updated Tue Sep 10 05:56:29 2024