5k98_BP : 3D-footprint complex

structure name	STRUCTURE OF HIPA-HIPB-O2-O3 COMPLEX
reference	Nature 524 59 2015
source	ESCHERICHIA COLI MP020980.2
experiment	X-ray (resolution=3.99, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3dnv_A 4z5h_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5k98_B interface=26,35,36,37,38,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQATiSnfennpdnttlttffkilqslelsmtlcdtk > 5k98_P interface=35,36,37,38,40, fqkiysptqlanamklvrqqngwtqselakkigiKQATiSnfennpdnttlttffkilqslelsmtlcdtk
interface signature	SKQATS/KQATS

Estimated binding specificities ?

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# IC=12.742 IC/col=0.708 n_of_columns=18

specificity:

A |   0  96   6   0   0   0  24  24  24  24  24  24   0   6   0  78   6  78
C |   0   0   6  96  96  96  24  24  24  24  24  24   0   6   0   6   6   6
G |   0   0   6   0   0   0  24  24  24  24  24  24  96  78  96   6   6   6
T |  96   0  78   0   0   0  24  24  24  24  24  24   0   6   0   6  78   6

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updated Thu Jun 25 06:11:14 2026