interface graph thumbnail
legend  pdf

structure nameMOUSE KLF4 E446P ZNF1-3 AND MPG/MPG SEQUENCE DNA COMPLEX STRUCTURE
(Krueppel-like factor 4)
referenceHashimoto et al. 'Nucleic 44 10177 2016
sourceMus musculus
experimentX-ray (resolution=2.45, R-factor=0.233)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
reference complex2wbs_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKSHRDRRSDH

Estimated binding specificities ?

readout + contactlogo
# IC=7.140 IC/col=0.793 n_of_columns=9 specificity:   
A |  96   0   0  24  24   0   0  13  13
C |   0   0   0  24  24   0   0  16  57
G |   0  96  96  24  24   0  96  54  13
T |   0   0   0  24  24  96   0  13  13
scan!

home
updated Thu Sep 12 21:38:46 2024