5kl2_A : 3D-footprint complex

structure name	WILMS TUMOR PROTEIN (WT1) ZNF2-4 IN COMPLEX WITH DNA (Wilms tumor protein)
reference	Hashimoto et al. 'Nucleic 44 10165 2016
source	Homo sapiens
experiment	X-ray (resolution=1.69, R-factor=0.166)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	5kl3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5kl2_A interface=17,19,20,23,45,46,47,48,51,75,76,77,78,81, ekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRSDElvRhhnmhqr
interface signature	RDQRRSDHTRSDER

Estimated binding specificities ?

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# IC=11.003 IC/col=1.100 n_of_columns=10

specificity:

A |  54   0   0   0   0   0  82   0   0   0
C |  13  96  14  96  96  83   1  96   0  96
G |  13   0   0   0   0   0  13   0  96   0
T |  16   0  82   0   0  13   0   0   0   0

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updated Thu Sep 12 21:43:14 2024