5kl5_A : 3D-footprint complex

structure name	WILMS TUMOR PROTEIN (WT1) ZNF2-4 Q369H IN COMPLEX WITH CARBOXYLATED DNA (Wilms tumor protein)
reference	Hashimoto et al. 'Nucleic 44 10165 2016
source	Homo sapiens
experiment	X-ray (resolution=2.29, R-factor=0.196)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	5kl3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5kl5_A interface=18,20,21,24,46,48,49,52,76,78,79,82, sekpyqcdfkdcerrfsRsDHlkRhqrrhtgvkpfqcktcqrkfsRsDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq
interface signature	RDHRRDHTRDER

Estimated binding specificities ?

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# IC=9.805 IC/col=1.089 n_of_columns=9

specificity:

A |   0   0   0   0   0   0   0  13  13
C |   0  96   0   0   0   0   0  13  13
G |  96   0  96   0  96  96  96  57  16
T |   0   0   0  96   0   0   0  13  54

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updated Thu Sep 12 21:43:21 2024