5kl6_A : 3D-footprint complex

structure name	WILMS TUMOR PROTEIN (WT1) Q369R ZNF2-4 IN COMPLEX WITH DNA (Wilms tumor protein)
reference	Hashimoto et al. 'Nucleic 44 10165 2016
source	Homo sapiens
experiment	X-ray (resolution=1.64, R-factor=0.175)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	5kl3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5kl6_A interface=16,18,19,22,44,46,47,50,74,76,77,80, kpyqcdfkdcerrfsRsDRlkRhqrrhtgvkpfqcktcqrkfsRsDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhqr
interface signature	RDRRRDHTRDER

Estimated binding specificities ?

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# IC=11.267 IC/col=1.127 n_of_columns=10

specificity:

A |  16   0   0   0   0   0  96   0  16   0
C |  48  96  96  96  96  80   0  96   0  96
G |  16   0   0   0   0   0   0   0  80   0
T |  16   0   0   0   0  16   0   0   0   0

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updated Thu Sep 12 21:43:24 2024