5kl7_A : 3D-footprint complex

structure name	WILMS TUMOR PROTEIN (WT1) ZNF2-4Q369R IN COMPLEX WITH CARBOXYLATED DNA (Wilms tumor protein)
reference	Hashimoto et al. 'Nucleic 44 10165 2016
source	Homo sapiens
experiment	X-ray (resolution=1.58, R-factor=0.165)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	5kl3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5kl7_A interface=17,19,20,23,45,46,47,48,51,75,77,78,81, ekpyqcdfkdcerrfsRsDRlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq
interface signature	RDRRRSDHTRDER

Estimated binding specificities ?

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# IC=9.298 IC/col=1.033 n_of_columns=9

specificity:

A |  67   0   0   0   0  96   9   0   9
C |   9   0  96  96  96   0  67   0  67
G |  11  96   0   0   0   0  11  96  11
T |   9   0   0   0   0   0   9   0   9

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updated Thu Sep 12 21:43:28 2024