interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ379 (COMPOUND 5'G)
(INTEGRASE)
referenceCherepanov et al. 'J. 60 7315 2017
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.55, R-factor=0.180)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

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# IC=1.826 IC/col=0.456 n_of_columns=4 specificity:   
A |  16  10  74   4
C |  16  10   7  81
G |  19  63   7   4
T |  45  13   8   7
scan!

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updated Thu Sep 12 21:49:12 2024