interface graph thumbnail
legend  pdf

structure nameTEAD1 BOUND TO DNA
(Transcriptional enhancer factor TEF-1)
referenceMorgunova et al. 'To ? ? ?
sourceHomo sapiens
experimentX-ray (resolution=3.29, R-factor=0.203)
structural superfamilyHomeodomain-like;
multimeric complexes5no6_AN 5no6_BI
reference complex5no6_N
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRKSSQV

Estimated binding specificities ?

readout + contactlogo
# IC=7.190 IC/col=0.899 n_of_columns=8 specificity:   
A |   5  25  13  79   0   0   0   1
C |  79   5  56   1   0   0  96  90
G |   7  50   5  16   0   0   0   5
T |   5  16  22   0  96  96   0   0
scan!

Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: TEAD1
GGAATGPubMed5nnx_A(8.75e-11)

home
updated Thu Sep 12 21:54:23 2024