interface graph thumbnail
legend  pdf

structure nameCLOSED, TERNARY STRUCTURE OF KOD DNA POLYMERASE
referenceDiederichs et al. 'PLoS 12 e0188005 2017
experimentX-ray (resolution=2.09, R-factor=0.197)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family B; DNA polymerase family B, exonuclease do;
reference complex7om3_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYYTKR

Estimated binding specificities ?

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# IC=2.340 IC/col=0.585 n_of_columns=4 specificity:   
A |   7   7   7   7
C |   7   7   7  75
G |   9  75  73   7
T |  73   7   9   7
scan!

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updated Sun Jun 28 13:45:45 2026