structure nameSTRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH
experimentNMR
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;Cyclin-like;Zinc beta-ribbon;TATA-box binding protein-like;Rap30/74 interaction domains;"Winged helix" DNA-binding domain;Transcription factor IIA TFIIA, beta-barrel domain;Transcription factor IIA TFIIA, alpha-helical domain;
reference complex5oqj_7 5oqj_M 5oqj_O 5oqj_Q 5oqj_R 5oqj_U 5oqj_W 5oqj_X
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signature///NVFLFVTNVFLFVT/RFKLVRTEGARD/RVLVETQNKLLDSK/YINYKAW

Estimated binding specificities ?

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# IC=6.672 IC/col=0.953 n_of_columns=7 specificity:   
A |  96  11  96   0  69  96  11
C |   0   9   0   0   9   0   9
G |   0   9   0   0   9   0   9
T |   0  67   0  96   9   0  67
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updated Tue Sep 10 08:10:18 2024