Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameSTRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH
experimentNMR
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1rm1_AC 5fyw_ABMORU 5fz5_AMORUW 5oqj_7AMOQRU 5oqj_BX 5oqj_EW 5oqm_7AMOQRU 5oqm_EW 5sva_AZcdfjn 5sva_Bg 6eu0_ABEPVYZ 6f40_ABEOPUVW 6f41_ABEPUVW 6f42_ABO 6f42_UVW 6f44_BMOUVW 6gyk_MOU 6gyl_MOQRUW 6gym_7MOQRW 6gym_BU 7ml0_7AMOQRWX 7ml2_7MORU 7ml4_ABRW 7ml4_MOU 7o4i_7ABMOQRUWX 7o4j_7MOQRUWX 7o72_7AMOQRUWX 7o73_7ABMOQRUWX 7o75_7ABEMOQRUX 7zs9_257AMOQRUWXabcdefgh 7zsa_7ABMOQRUWXabcdefgh 7zsb_7ABMOQRUWXabcdefgh
redundant complexes1rm1_A 6f42_U 5fyw 5fz5 5oqm 5sva 6eu0 6f40 6f41 6f44 6gyk 6gyl 6gym 7ml0 7ml2 7ml4 7o4i 7o4j 7o72 7o73 7o75 7zs9 7zsa 7zsb 8cen 8ceo
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFLFVT

Estimated binding specificities ?

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# IC=6.672 IC/col=0.953 n_of_columns=7 specificity:   
A |  96   9  96   0  67  96   9
C |   0   9   0   0   9   0   9
G |   0  11   0   0   9   0   9
T |   0  67   0  96  11   0  69
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updated Fri Sep 13 20:20:53 2024