5tkz_AB : 3D-footprint complex

structure name	MEC-8 N-TERMINAL RRM BOUND TO TANDEM GCAC LIGAND
reference	Mackereth et al. RNA 23 308 2017
source	Caenorhabditis elegans
experiment	X-ray (resolution=1.53, R-factor=?)
structural superfamily	RNA-binding domain, RBD;
reference complex	5tkz_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5tkz_A interface=4,6,8,33,37,44,45,47,49,79,81,83,84,85,87,88,89, qvrTlFvSglpmdakprelyllfrgargyegaLlkmTskngkpTSpVgFvtflsqqdaqdarkmlqgvrfdpeaaqvlRlElAKSnTKV > 5tkz_B interface=4,6,8,33,35,37,44,45,47,49,79,81,83,84,85,87,88, qvrTlFvSglpmdakprelyllfrgargyegaLlKmTskngkpTSpVgFvtflsqqdaqdarkmlqgvrfdpeaaqvlRlElAKSnTKv
interface signature	TFSLTTSVFREAKSTKV/TFSLKTTSVFREAKSTK

Estimated binding specificities ?

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# IC=12.981 IC/col=1.180 n_of_columns=11

specificity:

A |  96   0   0  96   0  24  88   0   0  96   0
C |   0   0  96   0  96  24   2   0  96   0  96
G |   0  96   0   0   0  24   2  96   0   0   0
T |   0   0   0   0   0  24   4   0   0   0   0

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updated Tue Sep 10 08:36:02 2024