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structure nameSTRUCTURE OF RBKR (RIBOFLAVIN KINASE) FROM THERMOPLASMA ACIDOPHILUM DETERMINED IN COMPLEX WITH CTP AND ITS COGNATE DNA OPERATOR
referenceRodionova et al. 'To ? ? ?
sourceThermoplasma acidophilum
experimentX-ray (resolution=1.85, R-factor=?)
structural superfamilyRiboflavin kinase-like;"Winged helix" DNA-binding domain;
reference complex5trd_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQQSSR/SSQQSSRK

Estimated binding specificities ?

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# IC=8.866 IC/col=0.591 n_of_columns=15 specificity:   
A |   0  96   0   0  68  24  24  24  24  24  24   6  75   0   0
C |  13   0  96   7  16  24  24  24  24  24  24   6   9   0   0
G |   6   0   0   0   6  24  24  24  24  24  24  75   6  96   0
T |  77   0   0  89   6  24  24  24  24  24  24   9   6   0  96
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updated Wed Jul 30 12:30:32 2025