5u33_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF AACC2C1-SGRNA-EXTENDED NON-TARGET DNA TERNARY COMPLEX
reference	Rajashankar et al. Cell 167 1814 2016
experiment	X-ray (resolution=3.75, R-factor=0.247)
reference complex	5u30_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5u33_A interface=119,120,123,124,143,145,207,217,399, smavksikvklrlddmpeiraglwklhkevnagvryytewlsllrqenlyrrspngdgeqecdktaeeckaellerlrarqvenghrgpagsddellqlarqlyellvpqaigakgdaQQiaRKflspladkdavgglgiakAgNkprwvrmreageweeekekaetrksadrtadvlraladfglkplmrvytdsemssvewkplRkgqavrtwdRdmfqqaiermmsweswnqrvgqeyaklveqknrfeqknfvgqehlvhlvnqlqqdmkeaspgleskeqtahyvtgralrgsdkvfekwgklapdapfdlydaeiknvqrrntrrfgshdlfaklaepeyqalwredasfltryavynsilrklnhakmfatftlpdatahpiwtrfdklggNlhqytflfnefgerrhairfhkllkvengvarevddvtvpismseqldnllprdpnepialyfrdygaeqhftgefggakiqcrrdqlahmhrrrrdvylnvsvrvqsqseargerrppyaavfrlvgdnhrafvhfdklsdylaehpddgklgsegllsglrvmsvalglrtsasisvfrvarkdelkpnskgrvpfffpikgndnlvavhersqllklpgeteskdlraireerqrtlrqlrtqlaylrllvrcgsedvgrrerswaklieqpvdaanhmtpdwreafenelqklkslhgicsdkewmdavyesvrrvwrhmgkqvrdwrkdvrsgerpkirgyakdvvggnsieqieylerqykflkswsffgkvsgqviraekgsrfaitlrehidhakedrlkkladriimealgyvyaldergkgkwvakyppcqlillaelseyqfnndrppsennqlmqwshrgvfqelinqaqvhdllvgtmyaafssrfdartgapgircrrvparctqehnpepfpwwlnkfvvehtldacplraddliptgegeifvspfsaeegdfhqihaalnaaqnlqqrlwsdfdisqirlrcdwgevdgelvliprltgkrtadsysnkvfytntgvtyyerergreksvvlmrdpsgiinrgnwtrqkefwsmvnqriegylvkqirs
interface signature	QQRKANRRN

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# IC=3.855 IC/col=0.964 n_of_columns=4

A |   0  92  96  19
C |   0   1   0  38
G |  96   2   0  19
T |   0   1   0  20

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updated Tue Dec 17 02:31:43 2024