5u8s_25 : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Mon Jan 5 22:14:48 2026

structure name	STRUCTURE OF EUKARYOTIC CMG HELICASE AT A REPLICATION FORK
reference	'Proc. 114 E697 2017 ELECTRON MICROSCOPY
experiment	X-ray (resolution=6.10, R-factor=?)
structural superfamily	Nucleic acid-binding proteins;P-loop containing nucleoside triphosphate hydrolases;
reference complex	5bk4_5 5bk4_6 5bk4_7 5bk4_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5u8s_2 interface=368,402,420, pnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiyknnydgnlnakngfpvfatiieansikrrefswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvlllgdpgtaksqilkyvektahravfatgqgasavgltasvRkdpitkewtleggalvladkgvclidefdkmndQdrtsiheameqqsisisKagivttlqarcsiiaaanpnggrynstlplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrsspipqellmkyihyartkiypklhqmdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikvvvdsfvdaqkvsvrrqlrrsfaiy > 5u8s_5 interface=362,367, nteiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdepsdiiplfetaitqvakrisinslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratylsimcrncrhttsitinnfntgntvslprscncgpdpyiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiynsknsgvairtpyikilgiqsdvetvtmfteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqRdpmtRefyleggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdnidfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelesterpitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaas