interface graph thumbnail
legend  pdf

structure nameTNA POLYMERASE, CLOSED TERNARY COMPLEX
(DNA polymerase)
referenceChaput et al. 'Nat 8 1810 2017
sourceThermococcus kodakarensis
experimentX-ray (resolution=3.20, R-factor=0.261)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family B; DNA polymerase family B, exonuclease do;
reference complex7om3_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRD

Estimated binding specificities ?

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# IC=2.689 IC/col=0.672 n_of_columns=4 specificity:   
A |  11   8   0   8
C |   8  17  96   8
G |   8  61   0  72
T |  69  10   0   8
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updated Sat Aug 2 09:42:02 2025