| structure name | CRYSTAL STRUCTURE OF MBP FUSED ACTIVATION-INDUCED CYTIDINE DEAMINASE (AID) IN COMPLEX WITH DCMP (MALTOSE-BINDING PERIPLASMIC PROTEIN,SINGLE-STRANDED DNA...) |
| reference | Qiao et al. 'Mol. 67 361 2017 |
| source | ESCHERICHIA COLI O157:H7, HOMO SAPIENS |
| experiment | X-ray (resolution=2.90, R-factor=0.252) |
| structural superfamily | Periplasmic binding protein-like II;Cytidine deaminase-like; |
| sequence family | Bacterial extracellular solutebinding prot; APOBEClike Nterminal domain; APOBEClike Cterminal domain; |
| redundant complexes | 5w1c_B |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--RGWA---------------------------------------- +--------5w0u_B +--------------1 RT-------------------------------------------- L +-2 +--------5zd4_C ! ! ----------------------------------YTPTKTKTYTLT +--3 +-----------------------5w2m_D ! ! ------RAHGTCHCACICWT----YCDT--YT--YGPG--DG--QA +-4 +-------------------------5sww_C ! ! ------------------------NC--KC---------------- --5 +----------------------------6vpc_F ! --------------------LGSC--TG--YGYG------------ +----------------------------2pfj_A |
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updated Fri Sep 13 20:38:26 2024