5w43_AB : 3D-footprint complex

structure name	STRUCTURE OF THE TWO-COMPONENT RESPONSE REGULATOR RCSB-DNA COMPLEX
reference	Center for Structural Genomics of Infectious Diseases (CSGID)
source	Escherichia coli str. K-12 substr. MG1655
experiment	X-ray (resolution=3.15, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5w43_A interface=172,173,174,176,177,178, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkgkkftpesvsrllekidkrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylssvt > 5w43_B interface=166,167,168,170,171,172, nnmnviiaddhpivlfgirksleqiewvnvvgefedstalinnlpkldahvlitdlsmpgdkygdgitlikyikrhfpslsiivltmnnnpailsavldldiegivlkqgaptdlpkalaalqkpesvsrllekikrlspkesevlrlfaegflvteiakklnrsIKTiSSQkksammklgvendiallnylss
interface signature	IKTSSQ/IKTSSQ

Estimated binding specificities ?

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# IC=4.912 IC/col=0.351 n_of_columns=14

specificity:

A |   9  60  70   6  70  22  24  24  22   7   2   8  19  56
C |  11  12  10   6  10  22  24  24  20   8  88  74  19  13
G |   9  12   8  78   8  22  24  24  20   7   4   7  19  14
T |  67  12   8   6   8  30  24  24  34  74   2   7  39  13

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updated Sat Dec 14 07:51:39 2024