5wc9_AB : 3D-footprint complex

structure name	HUMAN PIT-1 AND 4XCATT DNA COMPLEX
reference	Agarwal et al. 'Nucleic 46 929 2018
source	Homo sapiens
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex	1au7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5wc9_A interface=42,43,44,47,48,81,123,127,130, dspeirelekfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqlsfknacklkailskwleeaeqvgakrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekrvk > 5wc9_B interface=26,42,43,44,47,48,78,120,124,127,131, dspeirelekfanefkvrriklgytQtnvgealaavhgsefSQTtiCRfenlqlsfknacklkailskwleeaeqvrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekRvk
interface signature	SQTCRRVNQ/QSQTCRRVNQR

Estimated binding specificities ?

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# IC=14.012 IC/col=1.078 n_of_columns=13

specificity:

A |  89   7   0   0  96   0   6   6  68   0   0   0  96
C |   1   0   0  96   0   0  16  75   6   0   0  96   0
G |   0   0   0   0   0   0  13   9   9   6   0   0   0
T |   6  89  96   0   0  96  61   6  13  90  96   0   0

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updated Tue Sep 10 09:34:45 2024