5wc9_EF : 3D-footprint complex

structure name	HUMAN PIT-1 AND 4XCATT DNA COMPLEX
reference	Agarwal et al. 'Nucleic 46 929 2018
source	Homo sapiens
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex	1au7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5wc9_E interface=25,41,42,43,46,47,52,77,119,123,126,130, speirelekfanefkvrriklgytQtnvgealaavhgsefSQTtiCRfenlQlsfknacklkailskwleeaeqkrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekRvk > 5wc9_F interface=42,43,44,47,48,77,119,123,126,130, dspeirelekfanefkvrriklgytqtnvgealaavhgsefSQTtiCRfenlqlsfknacklkailskwleeaeqrRttisiaakdalerhfgeqnkpssqeimrmaeelnlekevvrVwfcNrrQrekRvk
interface signature	QSQTCRQRVNQR/SQTCRRVNQR

Estimated binding specificities ?

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# IC=14.211 IC/col=1.093 n_of_columns=13

specificity:

A |   0   0   0  96   0   8   8  96   8  16   0  96   0
C |   0   0  96   0   0  16  72   0   8   0  96   0   0
G |   0   0   0   0   0   0   8   0  16   8   0   0   0
T |  96  96   0   0  96  72   8   0  64  72   0   0  96

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updated Tue Sep 10 09:34:56 2024