5x5l_AE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION
reference	'Nucleic 45 9773 2017 X-RAY DIFFRACTION
source	ACINETOBACTER BAUMANNII
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	5x5l_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x5l_A interface=60,61,63,64,65,67,68,86, klyknieidtdthsvyihkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldnp > 5x5l_E interface=64,65,67,68,69,71,72,90, nklyknieidtdthsvyihenkkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldn
interface signature	RTDSHSKR/RTDSHSKR

Estimated binding specificities ?

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# IC=14.530 IC/col=0.727 n_of_columns=20

specificity:

A |   0   0  24  13  87   2   5   0  24  24  24   4   0  96   5  87  24  24   0  13
C |  94  96  24  68   5  90  13   0  24  24  24  90  96   0  87   2  24  24   0   5
G |   2   0  24   7   2   2  10   0  24  24  24   2   0   0   2   5  24  24   0   2
T |   0   0  24   8   2   2  68  96  24  24  24   0   0   0   2   2  24  24  96  76

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updated Wed Jul 30 13:43:19 2025