5x5l_AE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION
reference	'Nucleic 45 9773 2017 X-RAY DIFFRACTION
source	ACINETOBACTER BAUMANNII
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	5x5l_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x5l_A interface=60,61,63,64,65,67,68,86, klyknieidtdthsvyihkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldnp > 5x5l_E interface=64,65,67,68,69,71,72,90, nklyknieidtdthsvyihenkkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldn
interface signature	RTDSHSKR/RTDSHSKR

Estimated binding specificities ?

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# IC=14.645 IC/col=0.732 n_of_columns=20

specificity:

A |  82  96  24  24   4   2   0   0   2  24  24  24  96  70   4   0   7  24   0   2
C |   2   0  24  24   2   2   0   0   2  24  24  24   0   7   2   2   7  24   0   2
G |   2   0  24  24   2  83   0  96  88  24  24  24   0  12  88   4  80  24  96  88
T |  10   0  24  24  88   9  96   0   4  24  24  24   0   7   2  90   2  24   0   4

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updated Tue Sep 10 09:41:03 2024