5x5l_AE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION
reference	'Nucleic 45 9773 2017 X-RAY DIFFRACTION
source	ACINETOBACTER BAUMANNII
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	5x5l_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x5l_A interface=60,61,63,64,65,67,68,86, klyknieidtdthsvyihkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldnp > 5x5l_E interface=64,65,67,68,69,71,72,90, nklyknieidtdthsvyihenkkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldn
interface signature	RTDSHSKR/RTDSHSKR

Estimated binding specificities ?

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# IC=14.931 IC/col=0.747 n_of_columns=20

specificity:

A |   1   0  24  13  80   1   9   0  24  24  24   1   0  96   1  93  24  24   1   1
C |  94  96  24  63   4  93  13   0  24  24  24  93  96   0  90   1  24  24   4   1
G |   0   0  24  11  11   1  11   0  24  24  24   1   0   0   4   1  24  24   1   1
T |   1   0  24   9   1   1  63  96  24  24  24   1   0   0   1   1  24  24  90  93

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updated Mon Jan 5 23:19:35 2026