5x5l_AE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION
reference	'Nucleic 45 9773 2017 X-RAY DIFFRACTION
source	ACINETOBACTER BAUMANNII
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	5x5l_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x5l_A interface=60,61,63,64,65,67,68,86, klyknieidtdthsvyihkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldnp > 5x5l_E interface=64,65,67,68,69,71,72,90, nklyknieidtdthsvyihenkkillnltlteykiisfmidqphkvftrgelmnhcmnsdaleRTvDSHvSKlrkkleeqgifqmlinvRgvgyrldn
interface signature	RTDSHSKR/RTDSHSKR

Estimated binding specificities ?

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# IC=2.190 IC/col=0.109 n_of_columns=20

specificity:

A |  38  51  31  22  20  19  13   8  16  24  24  24  52  36  18  20  20  22  10  17
C |  19  15  23  22  19  19  13  10  16  24  24  24  14  20  18  19  22  22  10  15
G |  19  15  21  30  19  38  14  70  48  24  24  24  14  20  42  19  34  25  66  49
T |  20  15  21  22  38  20  56   8  16  24  24  24  16  20  18  38  20  27  10  15

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updated Thu Jun 25 10:32:58 2026