5x5l_BH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION
reference	'Nucleic 45 9773 2017 X-RAY DIFFRACTION
source	ACINETOBACTER BAUMANNII
experiment	X-ray (resolution=2.75, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x5l_B interface=57,58,60,61,64,65,83, nklyknietdthsvyillnltlteykiisfmidqphkvftrgelmnhcmndsdaleRTvDShvSKlrkkleeqgifqmlinvRgvgyrldnplav > 5x5l_H interface=60,61,63,64,67,68,86, nklyknieidtdthsvyihsillnltlteykiisfmidqphkvftrgelmnhcmsdaleRTvDShvSKlrkkleeqgifqmlinvRgvgyrldnp
interface signature	RTDSSKR/RTDSSKR

Estimated binding specificities ?

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# IC=7.953 IC/col=0.468 n_of_columns=17

specificity:

A |   0   0  15   0   0  24  24  24  24  72  24  24  24  24   9   0  76
C |  15   0  15   4   0  24  24  24  24   3  24  24  24  24  19   0   0
G |  81   0  57   0  96  24  24  24  24   6  24  24  24  24  11  96  15
T |   0  96   9  92   0  24  24  24  24  15  24  24  24  24  57   0   5

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updated Sat Dec 14 08:15:10 2024