5x5l_BH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RESPONSE REGULATOR ADER DNA BINDING DOMAIN IN COMPLEX WITH AN INTERCISTRONIC REGION
reference	'Nucleic 45 9773 2017 X-RAY DIFFRACTION
source	ACINETOBACTER BAUMANNII
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	5x5l_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x5l_B interface=57,58,60,61,64,65,83, nklyknietdthsvyillnltlteykiisfmidqphkvftrgelmnhcmndsdaleRTvDShvSKlrkkleeqgifqmlinvRgvgyrldnplav > 5x5l_H interface=60,61,63,64,67,68,86, nklyknieidtdthsvyihsillnltlteykiisfmidqphkvftrgelmnhcmsdaleRTvDShvSKlrkkleeqgifqmlinvRgvgyrldnp
interface signature	RTDSSKR/RTDSSKR

Estimated binding specificities ?

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# IC=7.837 IC/col=0.461 n_of_columns=17

specificity:

A |   6   0  19   0   0  24  24  24  24  78  24  24  24  24  17   0  74
C |  13   0  15   2   0  24  24  24  24   1  24  24  24  24  15   0   0
G |  74   0  49   0  96  24  24  24  24   0  24  24  24  24  11  96  21
T |   3  96  13  94   0  24  24  24  24  17  24  24  24  24  53   0   1

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updated Tue Sep 10 09:40:52 2024