interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX
referenceZhu et al. 'Protein 8 308 2017
sourceListeria monocytogenes
experimentX-ray (resolution=2.99, R-factor=?)
structural superfamilycAMP-binding domain-like;"Winged helix" DNA-binding domain;
reference complex5lej_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHSSASR/HSASR

Estimated binding specificities ?

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# IC=7.253 IC/col=0.725 n_of_columns=10 specificity:   
A |  75  89  20  61  24  24   6   0   0   0
C |  13   0  61  13  24  24   6   0   0   0
G |   0   6   6  13  24  24   2  96   0   0
T |   8   1   9   9  24  24  82   0  96  96
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updated Tue Sep 10 09:41:56 2024