5x6e_MN : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PRFA-DNA BINARY COMPLEX
reference	Zhu et al. 'Protein 8 308 2017
source	Listeria monocytogenes
experiment	X-ray (resolution=2.99, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x6e_M interface=181,182,183,184,186,187, naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgiaHSSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln > 5x6e_N interface=170,181,183,184,186,187, naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltMqelgyssgiaHsSAvSRiisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln
interface signature	HSSASR/MHSASR

Estimated binding specificities ?

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# IC=11.197 IC/col=0.861 n_of_columns=13

specificity:

A |  16  89  96   0  96  24  24   0   0   0   0  61  54
C |  13   0   0  96   0  24  24   0   0   0   0  16  13
G |  13   7   0   0   0  24  24   0  96   0   0  13  16
T |  54   0   0   0   0  24  24  96   0  96  96   6  13

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updated Sat Dec 14 08:17:07 2024