5x6m_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SMAD5-MH1 IN COMPLEX WITH A COMPOSITE DNA SEQUENCE
reference	Wang et al. 'Nucleic 43 9051 2015
source	Mus musculus
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	SMAD MH1 domain;
reference complex	6fzs_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x6m_E interface=61,63,65,70, pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves > 5x6m_F interface=61,63,65,70, pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves
interface signature	DRQK/DRQK

Estimated binding specificities ?

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# IC=9.582 IC/col=0.799 n_of_columns=12

specificity:

A |   1   0  62   0   9  24  24  43   0   0   0   0
C |   9   0  19  96  16  24  24  11   0  10  96   0
G |   0  92  15   0  67  24  24  28  96   0   0   0
T |  86   4   0   0   4  24  24  14   0  86   0  96

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updated Wed Jul 30 13:45:42 2025