5x6m_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SMAD5-MH1 IN COMPLEX WITH A COMPOSITE DNA SEQUENCE
reference	Wang et al. 'Nucleic 43 9051 2015
source	Mus musculus
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	SMAD MH1 domain;
reference complex	6fzs_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5x6m_E interface=61,63,65,70, pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves > 5x6m_F interface=61,63,65,70, pavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalsspgqpskcvtiprslDgRlQvshrKglphviycrvwrwpdlqshhelkpldicefpfgskqkevcinpyhykrves
interface signature	DRQK/DRQK

Estimated binding specificities ?

readout + contact

# IC=9.033 IC/col=0.753 n_of_columns=12

specificity:

A |  96   0  82   0  24  24  24  14   0   7   7  88
C |   0   0   0  96  24  24  24  61   0  14  89   0
G |   0  96  14   0  24  24  24  14  96  59   0   7
T |   0   0   0   0  24  24  24   7   0  16   0   1

scan!

home
updated Thu Jun 25 10:35:40 2026