5xuu_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF LACHNOSPIRACEAE BACTERIUM ND2006 CPF1 IN COMPLEX WITH CRRNA AND TARGET DNA (TCCA PAM) (LBCPF1)
reference	Nishimasu et al. 'Mol. 67 633 2017
source	LACHNOSPIRACEAE BACTERIUM ND2006
experiment	X-ray (resolution=2.50, R-factor=0.195)
reference complex	5xut_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xuu_A interface=149,524,533,536,537,586,587,590, msklekftncyslsktlrfkaipvgktqenidnkrllvedekraedykgvkklldryylsfindvlhsiklknlnnyislfrkktrtekenkelenleinlrkeiakafkgnegykslfkkdiietilpeflddkdeialvnsfngftTaftgffdnrenmfseeakstsiafrcinenltryisnmdifekvdaifdkhevqeikekilnsdydvedffegeffnfvltqegidvynaiiggfvtesgekikglneyinlynqktkqklpkfkplykqvlsdreslsfygegytsdeevlevfrntlnknseifssikkleklfknfdeyssagifvkngpaistiskdifgewnvirdkwnaeyddihlvtekyeddrrksfkkigsfsleqlqeyadadlsvveklkeiiiqkvdeiykvygsseklfdadfvlekslkkndavvaimkdlldsvksfenyikaffgegketnrdesfygdfvlaydillkvdhiydairnyvtqkpyskdkfklyfqnpQfmggwdkdKetDYratilrygskyylaimdkkyakclqkidkddvngnyekinykllpgpnKMlpKvffskkwmayynpsediqkiykngtfkkgdmfnlndchklidffkdsisrypkwsnaydfnfsetekykdiagfyreveeqgykvsfesaskkevdklveegklymfqiynkdfsdkshgtpnlhtmyfkllfdennhgqirlsggaelfmrraslkkeelvvhpanspianknpdnpkktttlsydvykdkrfsedqyelhipiainkcpknifkintevrvllkhddnpyvigidrgernllyivvvdgkgniveqyslneiinnfngiriktdyhslldkkekerfearqnwtsienikelkagyisqvvhkicelvekydavialedlnsgfknsrvkvekqvyqkfekmlidklnymvdkksnpcatggalkgyqitnkfesfksmstqngfifyipawltskidpstgfvnllktkytsiadskkfissfdrimyvpeedlfefaldyknfsrtdadyikkwklysygnririfrdweevcltsaykelfnkyginyqqgdirallceqsdkafyssfmalmslmlqmrnsitgrtdvdflispvknsdgifydsrnyeaqenailpknadangayniarkvlwaigqfkkaedekldkvkiaisnkewleyaqtsv
interface signature	TQKDYKMK

Estimated binding specificities ?

readout + contact

# IC=2.674 IC/col=0.669 n_of_columns=4

specificity:

A |   9   0   9  69
C |  11   0   9   9
G |   9  96  67   9
T |  67   0  11   9

scan!

home
updated Thu Sep 12 22:25:07 2024