5xut_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF LACHNOSPIRACEAE BACTERIUM ND2006 CPF1 IN COMPLEX WITH CRRNA AND TARGET DNA (TCTA PAM) (LBCPF1)
reference	Nishimasu et al. 'Mol. 67 633 2017
source	LACHNOSPIRACEAE BACTERIUM ND2006
experiment	X-ray (resolution=2.40, R-factor=0.195)
redundant complexes	5xus_A 5xuu_A 5xuz_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xut_A interface=149,524,533,536,537,582,586,587,590,596, msklekftncyslsktlrfkaipvgktqenidnkrllvedekraedykgvkklldryylsfindvlhsiklknlnnyislfrkktrtekenkelenleinlrkeiakafkgnegykslfkkdiietilpeflddkdeialvnsfngftTaftgffdnrenmfseeakstsiafrcinenltryisnmdifekvdaifdkhevqeikekilnsdydvedffegeffnfvltqegidvynaiiggfvtesgekikglneyinlynqktkqklpkfkplykqvlsdreslsfygegytsdeevlevfrntlnknseifssikkleklfknfdeyssagifvkngpaistiskdifgewnvirdkwnaeyddihlvtekyeddrrksfkkigsfsleqlqeyadadlsvveklkeiiiqkvdeiykvygsseklfdadfvlekslkkndavvaimkdlldsvksfenyikaffgegketnrdesfygdfvlaydillkvdhiydairnyvtqkpyskdkfklyfqnpQfmggwdkdKetDYratilrygskyylaimdkkyakclqkidkddvngnyekinykllPgpnKMlpKvffskKwmayynpsediqkiykngtfkkgdmfnlndchklidffkdsisrypkwsnaydfnfsetekykdiagfyreveeqgykvsfesaskkevdklveegklymfqiynkdfsdkshgtpnlhtmyfkllfdennhgqirlsggaelfmrraslkkeelvvhpanspianknpdnpkktttlsydvykdkrfsedqyelhipiainkcpknifkintevrvllkhddnpyvigidrgernllyivvvdgkgniveqyslneiinnfngiriktdyhslldkkekerfearqnwtsienikelkagyisqvvhkicelvekydavialedlnsgfknsrvkvekqvyqkfekmlidklnymvdkksnpcatggalkgyqitnkfesfksmstqngfifyipawltskidpstgfvnllktkytsiadskkfissfdrimyvpeedlfefaldyknfsrtdadyikkwklysygnririfrnnvfdweevcltsaykelfnkyginyqqgdirallceqsdkafyssfmalmslmlqmrnsitgrtdvdflispvknsdgifydsrnyeaqenailpknadangayniarkvlwaigqfkkaedekldkvkiaisnkewleyaqtsv
interface signature	TQKDYPKMKK

Estimated binding specificities ?

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# IC=2.917 IC/col=0.729 n_of_columns=4

specificity:

A |  12   0  12  60
C |  12  96   0  12
G |  12   0   0  12
T |  60   0  84  12

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updated Fri Sep 13 20:56:14 2024