5xvo_BDE : 3D-footprint complex

structure name	E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING DNA SAMPLING AND HALF-INTEGRATION STATES
reference	Nam et al. Nature 550 137 2017
source	ENTEROCOCCUS FAECALIS TX0027
experiment	X-ray (resolution=3.10, R-factor=?)
reference complex	5xvp_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xvo_B interface=146,150,153,206,207,208, mgwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpaNregHaaRsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhaNQFndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi > 5xvo_D interface= gwrtvvvnkhsklsyknnhlvfkaidhqelihlseidvlllettdislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanReghAarSyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanQFNdfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi > 5xvo_E interface=2,49,50,51,54, yRymrlllmfdmptdtasdrkayrkfrkflinegfimhqfsvyskillNDTanKamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge
interface signature	NHRNQF/RASQFN/RNDTK

Estimated binding specificities ?

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# IC=9.098 IC/col=0.505 n_of_columns=18

specificity:

A |   0  96   0  12  24  24  24  24  24  24  64  60  24  24   0   0   0   0
C |  96   0  12   8  24  24  24  24  24  24  12  12  24  24  80   0  84   0
G |   0   0   0  60  24  24  24  24  24  24   8  12  24  24  12   0  12  96
T |   0   0  84  16  24  24  24  24  24  24  12  12  24  24   4  96   0   0

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updated Wed Jul 30 14:17:49 2025