5xvo_IJLMN : 3D-footprint complex

structure name	E. FAE CAS1-CAS2/PRESPACER/TARGET TERNARY COMPLEX REVEALING DNA SAMPLING AND HALF-INTEGRATION STATES
reference	Nam et al. Nature 550 137 2017
source	ENTEROCOCCUS FAECALIS TX0027
experiment	X-ray (resolution=3.10, R-factor=?)
reference complex	5xvp_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xvo_I interface=11,46, mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvlllettDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi > 5xvo_J interface= gwrtvvvnkhSklsyknnhlvfkaidhqelihlseidvlllettdIslttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi > 5xvo_L interface= mgwrtvvvnkHsklsyknnhlvfkaidhqelihlseidvlllettDislttmllkrlidekilvlfcddkrlpigkilpfygrhdsslqltrqlawteerkgqvwtaiiaqkitnqslhlaqrdygqkaaallamraelrlfdpanreghaarsyfntlfgndftreqendinaglnygytlllsifarelvqtgcftqlglkhanqfndfnlasdlmepfrplvdqiiyenrkeafpimkrklfalfmntymykkkqmfltniatdytkhvvkvlnqeeegvpefgi > 5xvo_M interface=12,21,22,26, ymrlllmfdmpTdtasdrkaYRkfrKflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge > 5xvo_N interface=13,22,23, rymrlllmfdmpTdtasdrkaYRkfrkflinegfimhqfsvyskillndtankamlarlkqnnpqrglitllnvtekqfsrmiylhgeqdnrvansderivflge
interface signature	HD/SI/HD/TYRK/TYR

Estimated binding specificities ?

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# IC=4.573 IC/col=0.286 n_of_columns=16

specificity:

A |   0  24  24  24  24  17   8  24  96  24  24  24  24   0  24  69
C |  87  24  24  24  24  48   6  24   0  24  24  24  24   5  24  19
G |   5  24  24  24  24  14   8  24   0  24  24  24  24   4  24   4
T |   4  24  24  24  24  17  74  24   0  24  24  24  24  87  24   4

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updated Wed Jul 30 14:18:55 2025