5xxp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF CBNR_DBD-DNA COMPLEX
reference	Senda et al. 'FEBS 285 977 2018
source	Cupriavidus necator
experiment	X-ray (resolution=2.55, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5xxp_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xxp_A interface=28,29,30,31,33,34,52, mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar > 5xxp_B interface=28,29,30,31,33,34,52, mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar
interface signature	SQPPTRH/SQPPTRH

Estimated binding specificities ?

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# IC=10.677 IC/col=0.562 n_of_columns=19

specificity:

A |   0  10  96   0   6  24  24  24  24  24  10   0   3  96  80  24  24  24   1
C |   0  14   0  96  13  24  24  24  24  24  54   0   3   0   3  24  24  24   3
G |   0   0   0   0  65  24  24  24  24  24  13  96   5   0   0  24  24  24   3
T |  96  72   0   0  12  24  24  24  24  24  19   0  85   0  13  24  24  24  89

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updated Tue Jan 6 00:03:28 2026