5xxp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF CBNR_DBD-DNA COMPLEX
reference	Senda et al. 'FEBS 285 977 2018
source	Cupriavidus necator
experiment	X-ray (resolution=2.55, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xxp_A interface=28,29,30,31,33,34,52, mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar > 5xxp_B interface=28,29,30,31,33,34,52, mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar
interface signature	SQPPTRH/SQPPTRH

Estimated binding specificities ?

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# IC=10.454 IC/col=0.550 n_of_columns=19

specificity:

A |   0  15  96   0   7  24  24  24  24  24  17   0   1  67  91  24  24  24   3
C |   0   9   0  96   9  24  24  24  24  24  49   0   0  11   1  24  24  24   0
G |   0   3   0   0  71  24  24  24  24  24  25  96   3   5   1  24  24  24   1
T |  96  69   0   0   9  24  24  24  24  24   5   0  92  13   3  24  24  24  92

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updated Sat Dec 14 08:53:50 2024