5xxp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF CBNR_DBD-DNA COMPLEX
reference	Senda et al. 'FEBS 285 977 2018
source	Cupriavidus necator
experiment	X-ray (resolution=2.55, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5xxp_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5xxp_A interface=28,29,30,31,33,34,52, mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar > 5xxp_B interface=28,29,30,31,33,34,52, mefrqlkyfiavaeagnmaaaakrlhvSQPPiTRqmqaleadlgvvllersHrgieltaaghafledarrilelagrsgdrsraaar
interface signature	SQPPTRH/SQPPTRH

Estimated binding specificities ?

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# IC=10.055 IC/col=0.529 n_of_columns=19

specificity:

A |   0   8  96   0  14  24  24  24  24  24   6   0   2  76  68  24  24  24   2
C |   0   6   0  96  16  24  24  24  24  24  80   0   2   8   8  24  24  24   2
G |   0  10   0   0  52  24  24  24  24  24   8  96   2  10   8  24  24  24   2
T |  96  72   0   0  14  24  24  24  24  24   2   0  90   2  12  24  24  24  90

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updated Thu Jun 25 11:15:14 2026