5yj3_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TZAP AND TELOMERIC DNA COMPLEX
reference	Zhao et al. 'Cell 28 130 2018
source	Homo sapiens
experiment	X-ray (resolution=2.85, R-factor=?)
structural superfamily	beta-beta-alpha zinc fingers;
reference complex	5yj3_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5yj3_C interface=44,47,63,66, phfcqicgktfkaveqlrvhvrrhkgvrkfectecgykftrqaHlrRhmeihdrvenynprqRklRnlii > 5yj3_D interface=41,44,47,63,66, phfcqicgktfkaveqlrvhvrrhkgvrkfectecgykftRqaHlrRhmeihdrvenynprqRklR
interface signature	HRRR/RHRRR

Estimated binding specificities ?

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# IC=10.776 IC/col=1.078 n_of_columns=10

specificity:

A |  12   0  96   0   0   0  12   0  96   0
C |  12  12   0   0   0   0  12   0   0   0
G |  24   0   0  96  96  96  12   0   0  96
T |  48  84   0   0   0   0  60  96   0   0

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updated Tue Sep 10 10:28:16 2024