interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF TZAP AND TELOMERIC DNA COMPLEX
(Telomere zinc finger-associated protein)
referenceZhao et al. 'Cell 28 130 2018
sourceHomo sapiens
experimentX-ray (resolution=2.85, R-factor=0.228)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
multimeric complexes5yj3_CD
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRHRRR

Estimated binding specificities ?

readout + contactlogo
# IC=6.778 IC/col=0.968 n_of_columns=7 specificity:   
A |  12   1  96   0   0   0  10
C |  21  10   0   0   0   0  10
G |  10   0   0  96  96  96  21
T |  53  85   0   0   0   0  55
scan!

home
updated Fri Sep 13 21:03:12 2024