5ze0_CN : 3D-footprint complex

structure name	HAIRPIN FORMING COMPLEX, RAG1/2-NICKED(WITH DIDEOXY) 12RSS/23RSS COMPLEX IN MG2+
reference	Chuenchor et al. 'Mol. 70 358 2018
source	MUS MUSCULUS
experiment	X-ray (resolution=2.75, R-factor=?)
structural superfamily	Galactose oxidase, central domain;
reference complex	6cg0_A 6xnz_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ze0_C interface=59,466,468,471,575,579,582, hinkggrprqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmNgNfaRklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasEgneSgnKlfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn > 5ze0_N interface=7,29,33,70,71,85,89, rgkmssYaffvqtcreehkkkhpdasvnFsefSkkcserwkakekgkfedmakadkaryeremkrppsaFFlfcseyrpkikgeIgdvAkklgemwnntddkqpyekkaaklkekyek
interface signature	NNNRESK/YFSFFIA

Estimated binding specificities ?

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# IC=9.580 IC/col=0.330 n_of_columns=29

specificity:

A |  96  12  24  24  24  24  24  24  24  24  24  24  24  24  24  96  96  24  24  24  12  24  24  60   0  24  24  96   0
C |   0  84  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0  24  24  24  12  24  24  12   0  24  24   0   0
G |   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0  24  24  24  12  24  24  12  96  24  24   0  96
T |   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0  24  24  24  60  24  24  12   0  24  24   0   0

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updated Tue Sep 10 10:40:45 2024