6cg0_A : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 HFC COMPLEX (3.17 A) (VDJ RECOMBINATION-ACTIVATING PROTEIN 1)
source	MUS MUSCULUS
experiment	NMR
multimeric complexes	5ze0_CN 6cil_DN 6cim_DN 6v0v_AB 6xnz_AC 6xnz_BD
redundant complexes	5zdz_C 6v0v_A 6xnz_A 5ze0 5ze1 6cij 6cik 6cil 6cim 6xnx 6xny
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6cg0_A interface=49,456,458,461,565,569,572, hllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmNgNfaRklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasEgnqSgnKlfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna

No structural evidence for specific binding to DNA (<4 informative columns)

Dendrogram of similar interfaces ?

matrix format

  
  NG----------LGIG--RTNTNGRAPCRCSCECEGQGSGKG----               +-6cg0_A    
                                                       +-------2 
  --HT--KT--SCLGIGMGRGNTNGRG--------EGQGSGKG--QC       !       ! +6oes_A    
                                                     --3       +-1 
  ----EC------LGIG----NGNGRAPC--SCDCEGEGSTKG----       !         +3jbx_C    
                                                       ! 
  --YT--KTSG--LGIG------------------EGEGATKGKCKC   L   +---------6pr5_E

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updated Tue Dec 19 12:23:19 2023