6amk_AB : 3D-footprint complex

structure name	STRUCTURE OF STREPTOMYCES VENEZUELAE BLDC-WHII OPT COMPLEX
reference	'Nat 9 1139 2018 X-RAY DIFFRACTION
source	Streptomyces venezuelae
experiment	X-ray (resolution=3.29, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	6ama_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6amk_A interface=18,22,38, pplltpaevatmfrvdpKtvtRwakagkltsirtmggHrryreaevralmag > 6amk_B interface=15,17,21,37, plltpaevatmfrvDpKtvtRwakagkltsirtmggHrryreaevralmag
interface signature	KRH/DKRH

Estimated binding specificities ?

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# IC=9.496 IC/col=0.678 n_of_columns=14

specificity:

A |   5   0   8   6  83  24  24  24  24   4   0   4   0  83
C |   4   0   8  70   4  24  24  24  24   0   0   4  96   4
G |   4  96  70   4   5  24  24  24  24  92  96  83   0   4
T |  83   0  10  16   4  24  24  24  24   0   0   5   0   5

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updated Thu Jun 25 12:07:49 2026