6amk_AB : 3D-footprint complex

structure name	STRUCTURE OF STREPTOMYCES VENEZUELAE BLDC-WHII OPT COMPLEX
reference	'Nat 9 1139 2018 X-RAY DIFFRACTION
source	Streptomyces venezuelae
experiment	X-ray (resolution=3.29, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	6amk_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6amk_A interface=18,22,38, pplltpaevatmfrvdpKtvtRwakagkltsirtmggHrryreaevralmag > 6amk_B interface=15,17,21,37, plltpaevatmfrvDpKtvtRwakagkltsirtmggHrryreaevralmag
interface signature	KRH/DKRH

Estimated binding specificities ?

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# IC=9.702 IC/col=0.693 n_of_columns=14

specificity:

A |   4   0   9   0  84  24  24  24  24   4   0   0   0  81
C |   4   0  11  76   4  24  24  24  24   0   0   6  96   4
G |   7  96  67   1   4  24  24  24  24  91  96  86   0   7
T |  81   0   9  19   4  24  24  24  24   1   0   4   0   4

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updated Tue Sep 10 10:58:41 2024