6amk_AB : 3D-footprint complex

structure name	STRUCTURE OF STREPTOMYCES VENEZUELAE BLDC-WHII OPT COMPLEX
reference	'Nat 9 1139 2018 X-RAY DIFFRACTION
source	Streptomyces venezuelae
experiment	X-ray (resolution=3.29, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	6ama_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6amk_A interface=18,22,38, pplltpaevatmfrvdpKtvtRwakagkltsirtmggHrryreaevralmag > 6amk_B interface=15,17,21,37, plltpaevatmfrvDpKtvtRwakagkltsirtmggHrryreaevralmag
interface signature	KRH/DKRH

Estimated binding specificities ?

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# IC=9.518 IC/col=0.680 n_of_columns=14

specificity:

A |   4   0   8   4  83  24  24  24  24   4   0   4   0  84
C |   4   0   8  70   5  24  24  24  24   0   0   5  96   4
G |   5  96  72   6   4  24  24  24  24  91  96  83   0   4
T |  83   0   8  16   4  24  24  24  24   1   0   4   0   4

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updated Tue Jan 6 00:58:44 2026