6bdb_A : 3D-footprint complex

structure name	I-ONUI K227Y, D236A BOUND TO A3G SUBSTRATE (PRE-CLEAVAGE COMPLEX) (Ribosomal protein 3homing endonuclease-like protein fusion)
reference	McMurrough et al. 'To ? ? ?
source	Ophiostoma novo-ulmi subsp. americana
experiment	X-ray (resolution=1.50, R-factor=0.186)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	6bd0_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bdb_A interface=18,22,24,26,28,34,36,40,42,66,70,72,74,172,174,176,178,187,189,193,195,215,217,219,221,223,224,226,232,291, eesinpwiltgfadaegSfllRiRnNnKssvgyStElgfQiTlhnkdksileniqstwkvgvianSgdnAvSlKvtrfedlkviidhfekyplitqklgdymlfkqafcvmenkehlkingikelvrikaklnwgltdelkkafpeiisrslinknipnfkwlagftsgegCfFvNlIksksklgvQvQlvfSiTqhikdknlmnslitylgcgYiKeYnKsEFsWlafvvTkfsdindkiipvfqentligvkledfedwckvaklieekkhltesgldeikkiklnmnKgrvf
interface signature	SRRNKSEQTSASKCFNIQQSTYKYKEFWTK

Estimated binding specificities ?

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# IC=22.436 IC/col=1.068 n_of_columns=21

specificity:

A |  13   0   0   0   0  96   0   0  82  96  24   0   1   5  69   0   0   0   0   0   0
C |   8   0   5  96  96   0  96   8   4   0  24   8  91   0   6  96  75   0   0   0   0
G |  10   0   0   0   0   0   0   0   4   0  24  14   0  91  21   0   0   0   0   0   0
T |  65  96  91   0   0   0   0  88   6   0  24  74   4   0   0   0  21  96  96  96  96

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updated Fri Jan 9 05:34:20 2026