interface graph thumbnail
legend  pdf

structure nameMBD2 IN COMPLEX WITH METHYLATED DNA
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.05, R-factor=?)
structural superfamilyDNA-binding domain;
reference complex6c1t_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRDY/RDR

Estimated binding specificities ?

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# IC=5.947 IC/col=0.743 n_of_columns=8 specificity:   
A |  54   0  96  24  24  15   0   0
C |  13  96   0  24  24  54  96   0
G |  13   0   0  24  24  27   0  96
T |  16   0   0  24  24   0   0   0
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updated Wed Jul 30 15:35:49 2025