interface graph thumbnail
legend  pdf

structure nameMBD2 IN COMPLEX WITH METHYLATED DNA
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.05, R-factor=?)
structural superfamilyDNA-binding domain;
reference complex2ky8_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRDY/RDR

Estimated binding specificities ?

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# IC=5.564 IC/col=0.695 n_of_columns=8 specificity:   
A |   0   0  24  24  24   0   0  24
C |  96   0  24  24  24   0   0  12
G |   0  96  36  24  24   0  96  12
T |   0   0  12  24  24  96   0  48
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updated Thu Jun 25 12:36:46 2026